Please note that this is a preview version, that will be published to CRAN or BioConductor once the documentation is complete, and some other loose ends are tied up.
Download the R package: optimalCaptureSegmentation_0.9-4.tar.gz.
NOTE: please read the help-page on function 'findOptimalSegmentations()' after loading the package. In particular, it is advised to study the Example section, which should explain quite clearly what the findOptimalSegmentations() function is actually doing.
NOTE: Version 0.9-4 fixes a bug where the 'alphaEstimated' value for segmentation solutions was calculated incorrectly.